Applied Neurobiological Imaging

View fMRI data in BrainSuite

Written by Owen Phillips.Email Dr. Katherine Narr if you have any questions. For more information, see the protocols page. *Note* This protocol was written specifically for a NeuroAnatomy class, however, it can be used as a reference on how to load fMRI data in BrainSuite.

1. Viewing your fMRI data: Open Brainsuite by double clicking the icon now copied to your desktop called BrainSuite.
1. Click on Display Properties as indicated below by the arrow.
   
2. Click on Volume and load in your mean_func.nii image. Your screen should look similar the following image.

• Click on Display Properties in the menubarand click on Overlay. Open the file called rendered_thresh_zstat1.nii.
• Change the max threshold value to 5 for the overlaid image.
• Click on Image à Overlay1 LUT à hot.

• Find the activation near the precentral sulcus.